DNA Extraction

 

Materials needed (per Pair)

 

1 glass rod

1 100 ml beaker

10 ml pipets

shampoo

meat tenderizer

toothpicks

Parafilm

Cold ETOH or isopropanol

55C Water Bath

40 ml of phase E. coli broth culture or 2 agar plates with E. coli growing on the surface

 

Protocol:

 

1. Working in pairs, pipet 40 ml of the E. coli broth culture or scrap E. coli off the surface of 1-2 agar plates into 40 ml of DH20 into a clean 100 ml beaker.

 

2. Add 8 ml of clear shampoo and two “toothpicks full” of meat tenderizer to the culture. Cover and seal the top of the beaker with a piece of parafilm.  Slowly and carefully swirl the beaker to mix the 2 solutions.  Place the beaker into the 55-60C water bath and incubate for 10 min.

 

3.  Slowly add cold (the colder the better) ETOH (or isopropanol) to the side of the baker so that a layer of ETOH form s on the top of the bacterial mixture.

 

5.  Take the glass rod (make sure it is very clean) and hold it vertically so that it reaches the bottom of the beaker and then turn the rod slowly.  You should see a viscous mixture start to stick to the rod at the interface of the ETOH and bacteria.  Gradually increase the vigor by which you stir the solution.

 

6.  Remove your rod from the solution after you think the ball has stopped growing.  How big is the ball of DNA?  How did it fit into the bacteria?  Is there anything else sticking to the rod.

 

7. Squeeze the DNA ball gently against the inside surface of the beaker until you are left with a film on the rod and allow to air dry.